I was trying adsorption of several species on a Cu cluster. I could "make" several Cu clusters by calculating the initial coordinates gemetrcally and then relaxing the clusters. But I was finding it difficult to add species to specific sites on the cluster surface because the coordinates in 3D space are quite hard to figure out.
Are there any visualization tools that people would recommend? I tried Rasmol/Atomeye and they work great for visualizing the output(getting bondlenghts, angles etc.) but I couldn't find anything that allows me to "add"/manipulate species in a GUI. I hope this makes sense!
Appreciate any sugesstions on this. Thanks!
-Rahul
cluster manipulation GUI
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rpnabar
cluster manipulation GUI
Last edited by rpnabar on Wed Jun 14, 2006 11:58 pm, edited 1 time in total.
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tjf
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cluster manipulation GUI
I use molden. http://www.cmbi.ru.nl/molden/molden.html
Last edited by tjf on Thu Jun 15, 2006 9:13 am, edited 1 time in total.